evomics
← Workshop on Genomics

Workshop on Genomics

2023

Český Krumlov, Czech Republic

25

Sessions

75

Participants

27

Countries

27 faculty

Faculty

David Barnett· Maastricht UniversityAltor Blanco Miguez· PreBiomicsRayan Chikhi· Institut PasteurFrancesco Cicconardi· University of BristolSonya Dyhrman· Columbia UniversityEvan Eichler· University of WashingtonRosa Fernández· Institute of Evolutionary Biology (IBE, CSIC-UPF)Joan Ferrer Obiol· Colorado State UniversityErik Garrison· University of Tennessee Health Science CenterBrian Haas· Broad Institute of MIT and HarvardScott Handley· Washington University in St. LouisKatharina Hoff· Universität GreifswaldGuy Leonard· University of OxfordAntoine Limasset· University of LillePaolo Manghi· University of TrentoCamille Marchet· CNRS / University of LilleMercè Montoliu NerínNatalia Nenasheva· University of GreifswaldJosephine Paris· University of ExeterDoug Scofield· Uppsala UniversityFritz Sedlazeck· Baylor College of MedicineRachel Steward· Stockholm UniversityMarcela Uliano-Silva· Wellcome Sanger InstituteRobert Waterhouse· University of LausanneChris Wheat· Stockholm UniversityJames Whiting· University of ExeterMike Zody· Broad Institute

Instructors

Alena di Primio· Royal Netherland Institute for Sea Research (NIOZ)Janina Rinke· University of MünsterKartik Singhal· Washington UniversityMadeline Chase· Uppsala University and Swiss Ornithological InstituteMiloš Duchoslav· Charles University
15th May
09-12
Introduction and Orientation
Orientation
Josie Paris, Daniel Kintzl
14-17
Sequencing Technology and Study Design
Lecture
Mike Zody
17th May
09-12
Alignment
Lecture
Mike Zody
14-17
Variant Calling
Lecture
Erik Garrison
19-22
Structural Variants
Lecture
Fritz Sedlazeck
18th May
09-12
Genome Assembly: theory and principles
Lecture
Camille Marchet, Antoine Limasset
14-17
Genome Assembly: from reads to a genome
Practical
Marcela Uliano-Silva
19-22
Genome Assembly: from reads to a genome
Practical
Marcela Uliano-Silva
19th May
09-12
Genome Annotation
Lecture
Katharina Hoff, Natalia Nenasheva
14-17
Genome Annotation
Practical
Katharina Hoff, Natalia Nenasheva
19-22
Genomics Adventure
Practical
Josie Paris, Guy Leonard
20th May
09-12
Pangenomics
Lecture
Erik Garrison
14-15
BIG Data
Lecture
Rayan Chikhi
22nd May
09-12
Comparative Genomics
Lecture
Robert Waterhouse
14-17
Comparative Genomics
Practical
Francesco Cicconardi
23rd May
09-12
Phylogenomics
Lecture
Rosa Fernández
14-17
Transcriptomics
Lecture
Brian Haas
19-22
Differential Gene Expression
Practical
Rachel Steward
24th May
09-12
Genomics in the Ocean
Lecture
Sonya Dyhrman
14-17
Metagenomics & Metatranscriptomics
Lecture
Paolo Manghi, Aitor Blanco Miguez
19-22
Microbiome Analysis
Practical
David Barnett
25th May
09-12
Genome Structural Variation
Lecture
Evan Eichler
14-17
Population Genomics
Lecture
James Whiting
19-22
Best Practices in Handling Genomic Data
Lecture
Doug Scofield
26th May
09-12
Lies, Damn Lies, and Genomics
Lecture
Chris Wheat

Materials · 37 files

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