Workshop on Genomics

2024

Český Krumlov, Czech Republic

Sessions

Participants

Countries

23 faculty

Instructors

Daniel Méndez Aranda· Max Delbrück Center for Molecular MedicineJanina Rinke· University of MünsterKarthick Gajendiran· King Abdullah University of Science and TechnologyLuis Chica· Washington UniversityMiloš Duchoslav· Charles UniversityThea Rogers· University of Vienna

Date

Time

Topic

Type

Presenter(s)

8th Jan

09-12

Introduction and Orientation

Orientation

Josie Paris, Daniel Kintzl

14-17

Sequencing Technology

Lecture

Scott Handley

10th Jan

09-12

Alignment

Lecture

Rayan Chikhi

14-17

Genome Annotation

Lecture

Katharina Hoff

19-22

Genome Annotation practical

Practical

Katharina Hoff

11th Jan

09-12

Genome Assembly

Lecture

Camille Marchet, Antoine Limasset

14-17

Genome Assembly practical

Practical

Camille Marchet, Antoine Limasset

12th Jan

09-12

Variant Calling

Lecture

Erik Garrison

14-17

Structural Variant Calling

Lecture

Fritz Sedlazeck

19-22

Genomics Adventure

Practical

Guy Leonard

13th Jan

09-12

Lies, Damn Lies, and Genomics

Lecture

Chris Wheat

14-17

Pangenomics

Lecture

Erik Garrison

15th Jan

09-12

Transcriptomics and Single-cell Transcriptomics

Lecture

Brian Haas

19-22

Analysis of RNASeq Data

Practical

Rachel Steward

16th Jan

09-12

Genomics in the Ocean

Lecture

Sonya Dyhrman

14-17

Comparative Genomics

Lecture

Oleg Simakov

19-22

Microbiome Analysis

Practical

David Barnett

17th Jan

09-12

The wonders of genome assembly!

Lecture

Marcela Uliano-Silva

14-17

Population Genomics

Lecture

Vincenza Colonna

18th Jan

09-12

Genome Structural Variation

Lecture

Evan Eichler

14-17

Best Practices in Handling Genomic Data

Lecture

Dag Ahrén

19-22

Phylogenomics

Lecture

Rosa Fernández

19th Jan

09-12

BIG DATA

Lecture

Rayan Chikhi