evomics
← Workshop on Genomics

Workshop on Genomics

2025

Český Krumlov, Czech Republic

35

Sessions

61

Participants

28

Countries

26 faculty

Faculty

Dag Ahrén· Lund UniversityDavid Barnett· Maastricht UniversityRayan Chikhi· Institut PasteurFrancesco Cicconardi· University of BristolVincenza Colonna· Institute of Genetics and Biophysics, CNRMilos Duchoslav· Charles UniversitySonya Dyhrman· Columbia UniversityEvan Eichler· University of WashingtonJoan Ferrer Obiol· Colorado State UniversityErik Garrison· University of Tennessee Health Science CenterBrian Haas· Broad Institute of MIT and HarvardScott Handley· Washington University in St. LouisKatharina Hoff· Universität GreifswaldDaniel Kintzl· Town of Český KrumlovGuy Leonard· University of OxfordAntoine Limasset· University of LilleCamille Marchet· CNRS / University of LilleMercè Montoliu NerínJosephine Paris· University of ExeterValentina Peona· Swedish Natural Museum / Swiss VogelwarteOlga Vinnere Pettersson· Uppsala UniversityFritz Sedlazeck· Baylor College of MedicineRachel Steward· Stockholm UniversityMarcela Uliano-Silva· Wellcome Sanger InstituteChris Wheat· Stockholm UniversityMike Zody· Broad Institute

Instructors

Flávia Fernandes· University of HelsinkiJosé Costa· University of Porto & University of MontpellierMarcela Alvarenga· University of Porto & University of MontanaLuis Chica· Washington UniversityKartik Singhal· Washington UniversityMadeline Chase· Uppsala University and Swiss Ornithological Institute
5th Jan
18-22
Reception Dinner
Social
Everyone
6th Jan
09-12
Introduction and Orientation
Orientation
Josie Paris, Daniel Kintzl
14-17
Sequencing Technologies
Lecture
Mike Zody
19-22
Dreams, Fantasy Dreams, and Genomics
Social
Everyone
7th Jan
09-12
AMIs, Cloud Computing and UNIX Introduction
Lecture
Guy Leonard, Mercè Montoliu Nerín
14-17
Essential File Types in Bioinformatics
Lecture
Mike Zody
19-22
Introduction to UNIX
Practical
Mercè Montoliu Nerín
8th Jan
09-12
Alignment
Lecture
Rayan Chikhi
14-17
Genome Annotation
Lecture
Katharina Hoff
19-22
Genome Annotation
Practical
Katharina Hoff
9th Jan
09-12
Genome Assembly
Lecture
Camille Marchet, Antoine Limasset
14-17
Genome Assembly
Practical
Camille Marchet, Antoine Limasset
19-22
Structural Variant Calling
Practical
Fritz Sedlazeck
10th Jan
09-12
Experimental Design in Genomics
Lecture
Olga Vinnere Pettersson
14-17
Variant Calling
Practical
Erik Garrison
19-22
Introduction to R
Practical
Workshop Team
11th Jan
09-12
Lies, Damn Lies, and Genomics
Lecture
Chris Wheat
14-17
Genomics Adventure
Practical
Guy Leonard
19-22
Mid-Workshop Dinner
Social
Everyone
12th Jan
All Day
Free Day
Social
Everyone
13th Jan
09-12
Genome Structural Variation
Lecture
Evan Eichler
14-17
Pangenomics
Practical
Erik Garrison
19-22
Population Genomics
Practical
Vincenza Colonna
14th Jan
09-12
Transcriptomics
Lecture
Brian Haas
14-17
RNAseq and Gene Expression
Practical
Rachel Steward
19-22
Genomics Adventure / Open Lab
Practical
Guy Leonard
15th Jan
09-12
Genomics in the Ocean
Lecture
Sonya Dyhrman
14-17
Comparative Genomics
Practical
Francesco Cicconardi
19-22
Microbiome / eDNA Analysis
Practical
David Barnett
16th Jan
09-12
The Wonders of Genome Assembly!
Lecture
Marcela Uliano-Silva
14-17
Transposable Elements
Practical
Valentina Peona
19-22
Best Practices in Handling Genomic Data
Practical
Dag Ahrén
17th Jan
09-12
BIG DATA
Lecture
Rayan Chikhi
14-17
Round Table Discussions and Certificates
Orientation
Everyone
19-22
End of Workshop Party
Social
Everyone

Materials · 43 files

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