evomics
← Workshop on Population and Speciation Genomics

Workshop on Population and Speciation Genomics

2016

Český Krumlov, Czech Republic

28

Sessions

58

Participants

15

Countries

18 faculty

Faculty

Julia M.I. Barth· University of Oslo / University of BaselDaniel Berner· University of BaselAlex Buerkle· IlluminaAlexei Drummond· University of AucklandDaniel Falush· Institut Pasteur of ShanghaiMatteo Fumagalli· Queen Mary University of LondonOscar Gaggiotti· University of St AndrewsRyan Gutenkurst· University of ArizonaScott Handley· Washington University in St. LouisChris Jiggins· University of CambridgeFelicity Jones· University of Groningen (previously Max Planck Institute)Simon Martin· University of CambridgeMichael Matschiner· Natural History Museum, University of OsloBritta Meyer· University of HamburgLudovic Orlando· CNRS / University of ToulouseWalter Salzburger· University of BaselJan Stefka· University of South BohemiaEmiliano Trucchi· Marche Polytechnic University

Instructors

Julia M.I. Barth· University of OsloAdam Bazinet· University of MarylandFilip Husník· Biology Centre CASMilan Malinsky· University of CambridgeBritta Meyer· GEOMAR KielMoritz Muschick· EAWAGJan Stefka· Biology Centre CASEmiliano Trucchi· University of Vienna
24th Jan
09-12
Workshop introduction
Orientation
Scott Handley, Walter Salzburger
14-17
UNIX computer lab
Practical
Workshop Team
25th Jan
09-12
File formats, VCFtools, Plink
Lecture
Workshop Team
14-17
R and adegenet, STRUCTURE, smartpca
Practical
Daniel Falush
26th Jan
09-12
Bayesian and likelihood inference
Lecture
Alex Buerkle
14-17
Bayesian and likelihood inference activity
Practical
Alex Buerkle
27th Jan
09-12
Genotype and SNP calling
Lecture
Matteo Fumagalli
14-17
Genotype and SNP calling activity
Practical
Matteo Fumagalli
28th Jan
09-12
Introgression and admixture modeling
Lecture
Alex Buerkle
14-17
Introgression and admixture modeling activity
Practical
Alex Buerkle
29th Jan
09-12
Natural selection and adaptation
Lecture
Oscar Gaggiotti
14-17
Natural selection and adaptation activity
Practical
Oscar Gaggiotti
30th Jan
09-12
Population demography
Lecture
Ryan Gutenkunst
14-17
Population demography activity
Practical
Ryan Gutenkunst
19-22
Genomics of organismal diversification
Lecture
Walter Salzburger
31st Jan
09-12
Ancient genomics
Lecture
Ludovic Orlando
14-17
Ancient genomics activity
Practical
Ludovic Orlando
1st Feb
09-12
Demographic analysis with BEAST2
Lecture
Alexei Drummond
14-17
Demographic analysis with BEAST2 activity
Practical
Alexei Drummond
2nd Feb
09-12
Evolutionary population genomics
Lecture
Daniel Berner
14-17
Evolutionary population genomics activity
Practical
Daniel Berner
3rd Feb
09-12
Detecting selective sweeps
Lecture
Felicity Jones
14-17
Detecting selective sweeps activity
Practical
Felicity Jones
4th Feb
09-12
Introgression
Lecture
Daniel Falush
14-17
Introgression activity
Practical
Daniel Falush
5th Feb
09-12
Divergence and gene flow between species
Lecture
Chris Jiggins, Simon Martin
14-17
Divergence and gene flow between species activity
Practical
Chris Jiggins, Simon Martin
6th Feb
09-12
Wrap-up session
Discussion
Workshop Team

Materials · 49 files

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