← Workshop on Population and Speciation Genomics

Workshop on Population and Speciation Genomics

2025

Český Krumlov, Czech Republic

32

Sessions

68

Participants

29

Countries

20 faculty

Faculty

Julia M.I. Barth· University of Oslo / University of Basel Magdalena Bohutinska· Charles University in Prague Matthew Hahn· Indiana University Scott Handley· Washington University in St. Louis Michael Hofreiter· University of Potsdam Andrew Kern· University of Oregon Alexander Leonard· University of Exeter Milan Malinsky· University of Basel Michael Matschiner· Natural History Museum, University of Oslo Joana Meier· Wellcome Sanger Institute Katie Peichel· University of Bern Valentina Peona· Swedish Natural Museum / Swiss Vogelwarte Martin Petr· University of Copenhagen Walter Salzburger· University of Basel Vitor Sousa· University of Lisbon Jan Stefka· University of South Bohemia Alexander Suh· Uppsala University Emiliano Trucchi· Marche Polytechnic University Georgia Tsambos· University of Washington Michael Westbury· University of Copenhagen

Date

Time

Topic

Type

Presenter(s)

19th Jan

14-17

UNIX Primer

Practical

Workshop Team

20th Jan

09-12

Workshop Introduction

Orientation

Workshop Team

14-17

Likelihood and Probability

Lecture

Michael Matschiner

19-22

AMI Introduction & Probability Activity

Practical

Workshop Team

21st Jan

09-12

Molecular Population Genomics

Lecture

Matthew Hahn

14-17

Population Genomics Primer I

Practical

Workshop Team

19-22

Population Genomics Primer II

Practical

Workshop Team

22nd Jan

09-12

Coalescent Theory

Lecture

Matthew Hahn

14-17

Model-based Inference of Population History

Lecture

Vitor Sousa

19-22

fastsimcoal2 Activity

Practical

Vitor Sousa

23rd Jan

09-12

Structural Variation

Lecture

Alex Suh

14-17

Structural Variation Activity

Practical

Valentina Peona

19-22

Pangenomics

Lecture

Alexander Leonard

24th Jan

09-12

Machine Learning

Lecture

Andrew Kern

14-17

Machine Learning Activity

Practical

Andrew Kern

19-22

Experimental Design

Lecture

Joana Meier, Workshop Team

25th Jan

09-12

The Genomics of Organismal Diversification

Lecture

Walter Salzburger

14-17

Open Lab

Practical

Workshop Team

27th Jan

09-12

Hybridisation

Lecture

Joana Meier

14-17

D-statistics Activity

Practical

Workshop Team

19-22

Tree-based Introgression Detection Activity

Practical

Workshop Team

28th Jan

09-12

Combining Genomics with Experimental Studies of Adaptation

Lecture

Katie Peichel

14-17

Detecting Positive Selection

Practical

Magdalena Bohutínská

19-22

Selective Sweep Identification

Practical

Joana Meier

29th Jan

09-12

Coalescent Simulation and Inference Activity 1/2

Practical

Georgia Tsambos

14-17

Coalescent Simulation and Inference Activity 2/2

Practical

Georgia Tsambos

19-22

Building Intuition into Population Genetics Fundamentals and Inference

Lecture

Martin Petr

30th Jan

09-12

Conservation Genomics

Lecture

Emiliano Trucchi

14-17

Genetic Load Activities

Practical

Emiliano Trucchi

19-22

Open Lab

Practical

Workshop Team

31st Jan

09-12

Ancient Genomics

Lecture

Michael Hofreiter

14-17

Ancient Genomics Activity

Practical

Michael Westbury

Materials · 26 files