Český Krumlov, Czech Republic
Date
Time
Topic
Type
Presenter(s)
Fort Collins, Colorado, USA
Date
Time
Topic
Type
Presenter(s)
10th Jul
19-22
Workshop Reception
Social
Workshop Team
11th Jul
09-12
Workshop Introduction
Lecture
Scott Handley
14-17
Identification and Detection of Structural Variation
Lecture
Evan Eichler
19-22
Laboratory Introduction
Practical
Workshop Team
12th Jul
09-12
Genomic Study Design
Lecture
Mike Zody
14-17
Life Technologies-Ion Torrent and Roche 454 Lectures
Lecture
Craig Cummings, Sepideh Rogers
19-22
Unix Tutorial
Practical
Workshop Team
13th Jul
09-12
Data Quality Assessment and Quality Control
Lecture
Workshop Team
14-17
Perl Programming
Lecture
Jason Stajich
19-22
BioPerl Laboratory
Practical
Jason Stajich
14th Jul
09-12
Genome Assembly
Lecture
Shaun Jackman
14-17
ABySS Laboratory I
Practical
Shaun Jackman
19-22
ABySS Laboratory II
Practical
Shaun Jackman
15th Jul
09-12
Genome Assembly Lab: Velvet and Bowtie I
Practical
Workshop Team
14-17
Genome Assembly Lab: Velvet and Bowtie II
Practical
Workshop Team
19-22
Open Lab
Practical
Workshop Team
16th Jul
09-12
Transcriptomics
Lecture
Manuel Garber
14-17
Transcriptomics Lab: Scripture
Practical
Manuel Garber
19-22
Workshop Cookout
Social
Workshop Team
17th Jul
all day
Free Day
Social
Workshop Team
18th Jul
09-12
GMOD/GBrowse
Lecture
Sheldon McKay
14-17
GMOD/GBrowse Laboratory
Practical
Sheldon McKay
19-22
Open Lab
Practical
Workshop Team
19th Jul
09-12
Metagenomics
Lecture
Scott Handley
14-17
Metagenomics Laboratory
Practical
Scott Handley
19-22
Individual Projects
Practical
Workshop Team
20th Jul
09-12
Genome Annotation
Lecture
Kendra Kerr Nightingale
14-17
Genome Annotation Laboratory
Practical
Kendra Kerr Nightingale
19-22
Individual Projects
Practical
Workshop Team
21st Jul
09-12
Participant Presentations
presentation
Workshop Team
14-17
Individual Projects
Practical
Workshop Team
19-22
Open Lab
Practical
Workshop Team
22nd Jul
09-12
Participant Presentations
presentation
Workshop Team
14-17
Workshop Wrap-up and Discussion
Lecture
Scott Handley
19-22
End of Workshop Dinner
Social
Workshop Team
23rd Jul
09-12
Departure Day
Social
Workshop Team
Smithsonian Institution, Washington D.C., USA
Date
Time
Topic
Type
Presenter(s)
3rd Oct
09-12
Workshop Introduction
Lecture
Michael Cummings
09-12
Genomic Study Design
Lecture
Mike Zody
14-16
Laboratory Introduction
Practical
Workshop Team
16-18
Unix Tutorial
Practical
Workshop Team
4th Oct
09-12
Data Quality Assessment and Control
Lecture
Workshop Team
09-12
File Formats
Lecture
Workshop Team
14-18
Galaxy: Introduction and Introductory Laboratory
Practical
Anton Nekrutenko
5th Oct
09-12
Assembly Lecture
Lecture
Inanc Birol, Shaun Jackman
14-18
ABySS Laboratory
Practical
Shaun Jackman, Inanc Birol
6th Oct
09-12
Metagenomics Lecture
Lecture
Jay Evans, Scott Cornman
14-18
Metagenomics Laboratory
Practical
Scott Handley
7th Oct
09-12
Transcriptomics Lecture
Lecture
Manuel Garber
14-18
Transcriptomics Lab: Scripture
Practical
Manuel Garber