evomics
← Workshop on Phylogenomics

Workshop on Phylogenomics

2019

Český Krumlov, Czech Republic

30

Sessions

38

Participants

19

Countries

16 faculty

Faculty

Stephen Crotty· La Jolla Institute for ImmunologyMario dos Reis· Queen Mary University of LondonToni Gabaldón· Institut de Recerca BiomèdicaLaszlo Garamszegi· Centre for Ecological Research, BudapestScott Handley· Washington University in St. LouisTracy Heath· Iowa State UniversityAnna Karnkowska· University of WarsawLaura Kubatko· Ohio State UniversityMarina Marcet-Houben· Barcelona Supercomputing CenterJordi Paps Montserrat· University of BristolAntonis Rokas· Vanderbilt UniversityCeline Scornavacca· CNRSJason Stajich· University of California, RiversideJacob Steenwyk· UC Berkeley / HHMIGergely Szollosi· Eötvös Loránd UniversityXiaofen Zhou· Wuhan Technology and Business University
21st Jan
09-12
Introduction and Orientation
Orientation
Antonis Rokas
14-17
Lab Introduction
Practical
Eric, Anna
22nd Jan
09-12
Introduction to Phylogenomics
Lecture
Antonis Rokas
14-17
Alignment and Alignment Trimming
Practical
Lisa, Marina
19-22
Tree Visualization & Tree Challenge
Practical
Lisa, Marina
23rd Jan
09-12
Introduction to Phylogenetics, Orthology and Paralogy
Lecture
Toni Gabaldón
14-17
Orthology and Paralogy Prediction Lab
Practical
Toni Gabaldón, Marina Marcet-Houben
19-22
Partitioning and Concatenation Laboratory
Practical
Jacob
24th Jan
09-12
Introduction to Methods and Software for Phylogenomics
Lecture
Xiaofan Zhou
14-17
RAxML-NG Introduction and Laboratory
Practical
Alexey Kozlov
19-22
IQ-tree Introduction and Tutorial
Practical
Stephen Crotty
25th Jan
09-12
Non-Vertical Evolution & Phylogenetic Networks
Lecture
Celine Scornavacca
14-17
Networks Lab Tutorial
Practical
Celine Scornavacca
19-22
Phylobayes Intro
Practical
Xiaofan Zhou
26th Jan
09-12
Coalescent Methods
Lecture
Laura Kubatko
14-17
Coalescent Methods Lab
Practical
Laura Kubatko
28th Jan
09-12
Bayesian Phylogenetic Analysis
Lecture
Mario dos Reis
14-17
Molecular Clocks and Dating Analysis
Lecture
Tracy Heath
19-22
Bayesian MCMC Tutorial
Practical
Tracy Heath, Mario dos Reis
29th Jan
09-12
Trait evolution and ancestral state reconstruction
Lecture
Laszlo Garamszegi
14-17
Trait evolution and ancestral state reconstruction lab
Practical
Laszlo Garamszegi
19-22
Internode certainty and concordance factors tutorial
Practical
Jacob, Tracy Heath, Marina
30th Jan
09-12
Evolutionary Genomics
Lecture
Jason Stajich
14-17
Evolutionary Genomics Practical
Practical
Jason Stajich
19-22
Discussion on phylogenomic pipelines
Discussion
Marina, Ania
31st Jan
09-12
Reconstructing Ancestral Genomes to Understand Major Transitions
Lecture
Jordi Paps Montserrat
14-17
Phylogenomics presentations
presentation
Martin Kolisko, Anna Karnkowska
19-22
Open Lab
Practical
Workshop Team
1st Feb
09-12
Horizontal Gene Transfer
Lecture
Gergely Szöllősi
14-17
Horizontal Gene Transfer Lab
Practical
Gergely Szöllősi

Materials · 34 files

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