The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated data sets.
Features include:
- Support for a wide variety of data types
- Genetic variation (copy number, loss of heterozygosity, somatic mutations)
- Gene/microRNA expression
- RNAi screens
- Epigenetic data
- Genomic annotations
- Sequence alignments
- Easy access to genomes and data sets hosted by the Broad Institute
- Support for Windows, Mac OS X and Linux
Download:
Documentation:
A quick tutorial is available to get you up and running.
Additional Resource:
An IGVworkshop slide set 2013 courtesy of Dr. James Robinson