Registration fee: $350.00

The Harvard University Center for AIDS Research; the Ragon Institute of MGH, MIT and Harvard; and the Clinical and Translational Epidemiology Unit at MGH presents a week-long workshop focused exclusively on approaches to the analysis of high-throughput transcriptome data.

This intensive, hands-on course will feature morning and afternoon sessions taught by expert faculty and technical assistants.  All participants will acquire fundamental computational skills, appropriate study design, data interpretation, and overall literacy in bioinformatics.

When: 11-15, September, 2017 : Morning Sessions 9:00 – 12:00 | Afternoon Sessions 1:00 – 4:00

Where: Ragon Institute

Fee: There is a $350 registration fee to offset the costs of providing this 5 day workshop. Breakfast, lunch, and access to Amazon Web Services cloud infrastructure are included. A networking reception will be held for all participants who complete the workshop.

Application Information is available at: https://www.events.harvard.edu/profile/form/index.cfm?PKformID=0x5128498bae

Amazon Web Services Information: https://docs.google.com/spreadsheets/d/1gB_s97yKiqaWolJY5aNr0R7BcyO5TboOPpCcKIKDCZg/edit?usp=sharing

PuTTY: https://www.chiark.greenend.org.uk/~sgtatham/putty/latest.html

MobaXterm: http://mobaxterm.mobatek.net

Alejandro’s dropbox link: Here


Monday Topic Faculty Member Institution
Monday AM UNIX and Computing Environment Guy Leonard University of Exeter
Tuesday Introduction to R – SlidesExercise Scott Handley Washington University School of Medicine
AM Transcriptomics Lecture – Updated Brian Haas The Broad Institute
PM Transcriptomics Lab Brian Haas The  Broad Institute
AM Differential Expression – Intro Slides Alejandro Reyes Dana-Farber Cancer Institute
PM Differential Expression Lab Alejandro Reyes Dana-Farber Cancer Institute
AM Single-cell Transcriptomics Peter Kharchenko Harvard Medical School
PM Single-cell Transcriptomics Lab – GitHub Link Peter Kharchenko Harvard Medical School